NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE160620 Query DataSets for GSE160620
Status Public on Dec 17, 2020
Title ATAC-seq in NOTCH1-induced mouse T-ALLs
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Here we report the genome-wide open chormatin profile (ATACseq) of a NOTCH1-induced mouse T-cell Acute Lymphoblastic Leukemia
 
Overall design ATACseq analysis of a mouse NOTCH1-induced leukemia (2 replicates)
 
Contributor(s) Herranz D
Citation(s) 33458694
Submission date Nov 02, 2020
Last update date Mar 18, 2021
Contact name Daniel Herranz
E-mail(s) dh710@cinj.rutgers.edu
Organization name Rutgers Cancer Institute of New Jersey
Street address 195 Little Albany Street
City New Brunswick
State/province New Jersey
ZIP/Postal code 08901
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (2)
GSM4876084 NOTCH1-induced leukemia replicate1
GSM4876085 NOTCH1-induced leukemia replicate2
Relations
BioProject PRJNA673809
SRA SRP290795

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE160620_RAW.tar 402.1 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap