|
| Status |
Public on Dec 28, 2020 |
| Title |
HPV16 alignment using RNA sequencing data in head and neck quamous cell carcinoma (HNSCC) |
| Organisms |
Homo sapiens; Human papillomavirus 16 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Detection of HPV16 RNA expression of separately for each gene using RNA sequencing data from head and neck squamous cell carcinoma.
|
| |
|
| Overall design |
HPV16 gene alignment in HNSCC
|
| |
|
| Contributor(s) |
Ottensmeier CH |
| Citation(s) |
33575210 |
| Submission date |
Oct 24, 2020 |
| Last update date |
Feb 16, 2021 |
| Contact name |
JAYA THOMAS |
| E-mail(s) |
jaya.thomas@soton.ac.uk
|
| Organization name |
University of Southampton
|
| Department |
Cancer Science
|
| Street address |
MP824 Somers Building, Southampton General Hospital, Tremona Road,
|
| City |
Southampton |
| ZIP/Postal code |
SO16 6YD |
| Country |
United Kingdom |
| |
|
| Platforms (2) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
| GPL29292 |
Illumina NovaSeq 6000 (Homo sapiens; Human papillomavirus type 16) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA671598 |
| SRA |
SRP288435 |
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