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Series GSE159220 Query DataSets for GSE159220
Status Public on Oct 09, 2020
Title Search for a novel diagnostic marker for liver cancer.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary Analysis of the circular RNA expression profiles of tumor and normal tissue samples from Hepatocellular carcinoma (HCC).Find potential circular RNA to serve as diagnostic marker for liver cancer.
 
Overall design Tumor and non-tumor parts are extracted from obtained HCC tissues.
 
Contributor(s) Zhang Y, Qian Y
Citation(s) 35068348
Submission date Oct 08, 2020
Last update date Apr 05, 2022
Contact name yongwei zhang
E-mail(s) zhangyunw126@126.com
Phone +8617368836527
Organization name First Affiliated Hospital of Anhui Medical University
Street address anhui medical university
City Hefei
State/province China
ZIP/Postal code 230022
Country China
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (6)
GSM4823246 tumor tissue_HCC_1
GSM4823247 tumor tissue_HCC_2
GSM4823248 tumor tissue_HCC_3
Relations
BioProject PRJNA668068
SRA SRP286740

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159220_All.SRPBM.xls.gz 130.6 Kb (ftp)(http) XLS
GSE159220_Annotated_circRNA.txt.gz 583.6 Kb (ftp)(http) TXT
GSE159220_DE-marked.txt.gz 2.2 Kb (ftp)(http) TXT
GSE159220_GroupDE_significant_UpDown.xls.gz 102 b (ftp)(http) XLS
GSE159220_RAW.tar 210.0 Kb (http)(custom) TAR (of TXT)
GSE159220_circRNA_Group_control-VS-test_DE_significant.xls.gz 2.2 Kb (ftp)(http) XLS
GSE159220_control-VS-test_DE.xls.gz 138.5 Kb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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