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| Status |
Public on Feb 28, 2021 |
| Title |
Complex-dependent histone acetyltransferase activity of KAT8 determines its role in transcriptional regulation and cellular homeostasis (ChIP-sequecing data) |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Histone acetylation is associated with open chromatin and transcriptionally active genes. Specifically, acetylation of lysine 16 on histone H4 (H4K16ac) has been shown to prevent the assembly of nucleosomal arrays in vitro. This modification is catalyzed by the MYST-family histone acetyltransferase KAT8 (also known as MOF and MYST1), which is part of two distinct chromatin-associated complexes: NSL and MSL. While extensively studied in Drosophila, the functions of H4K16ac and the two KAT8-containing complexes in mammalian cells are not well understood. Here, we demonstrate a surprising complex-dependent activity of KAT8. We found that KAT8 catalyzes H4K5 and H4K8 acetylation as part of the NSL complex, whereas it catalyzes the bulk of H4K16 acetylation as part of the MSL complex. Furthermore, we show that the core proteins of the MSL complex and H4K16ac are not required for cell proliferation and global chromatin accessibility, whereas the NSL complex is essential for cell survival, as it is enriched at the promoters of housekeeping genes and is required for their transcription initiation. In summary, we show that KAT8 switches catalytic activity and function depending on its associated proteins, and that, as part of the NSL complex, it catalyzes H4K5 and H4K8 acetylation required for the expression of genes essential for cell survival.
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| Overall design |
39 ChIP-sequencing samples. Where indicated, input or bait KD was used as a control. Where indicated, spike-in normalization factors are provided
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| Contributor(s) |
Radzisheuskaya A, Helin K |
| Citation(s) |
33657400 |
| |
| Submission date |
Sep 29, 2020 |
| Last update date |
Jun 07, 2021 |
| Contact name |
Aliaksandra Radzisheuskaya |
| E-mail(s) |
ar570a@gmail.com
|
| Organization name |
The Institute of Cancer Research
|
| Department |
Cancer Biology
|
| Street address |
237 Fulham road
|
| City |
London |
| ZIP/Postal code |
SW36JB |
| Country |
United Kingdom |
| |
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| Platforms (2) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
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| Samples (39)
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| Relations |
| BioProject |
PRJNA666402 |
| SRA |
SRP285792 |
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