NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE158322 Query DataSets for GSE158322
Status Public on Dec 31, 2022
Title Polycomb complexes in skin epithelium development II
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Polycomb group (PcG) proteins are essential epigenetic transcriptional regulators. Traditionally, PcG proteins function as two multi-subunit complexes, Polycomb repressive complex 1 (PRC1) and PRC2, which largely overlap in their genomic binding and cooperate to establish repressive chromatin domains demarcated by H2AK119ub and H3K27me3. Here, using the developing skin epidermis as a paradigm, we uncovered a functional redundancy between Polycomb complexes in the repression of unwanted non-lineage genes.
 
Overall design Newborn mouse epidermal progenitor cells were FACS purified. Immunoprecipitated chromatin was analyzed by ChIP-seq.
 
Contributor(s) Cohen I, Zheng D, Ezhkova E
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 21, 2020
Last update date Dec 31, 2022
Contact name Deyou Zheng
E-mail(s) deyou.zheng@einsteinmed.edu
Organization name Albert Einstein College of Medicine
Street address 1300 Morris Park Ave
City Bronx
State/province NY
ZIP/Postal code 10461
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (7)
GSM4797762 H3K27me3 ontrol_Input
GSM4797763 Control_H3K27me3_1
GSM4797764 Control_H3K27me3_2
This SubSeries is part of SuperSeries:
GSE158324 Polycomb complexes in skin epithelium development
Relations
BioProject PRJNA664807
SRA SRP284318

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158322_CTL_H3K27me3_mm10_peaks.bed.gz 33.8 Kb (ftp)(http) BED
GSE158322_Ring1a_b2KO_H3K27me3_mm10_peaks.bed.gz 22.0 Kb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap