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Series GSE15805 Query DataSets for GSE15805
Status Public on Apr 23, 2009
Title Duke-UNC-Texas-EBI ENCODE expression project
Project ENCODE
Organism Homo sapiens
Experiment type Expression profiling by array
Summary These samples are being analyzed by the Duke-UNC-Texas-EBI ENCODE consortium. Expression from these cell types will compared to three whole genome open chromatin methodologies: DNaseI hypersensitivity (DNase-seq), Formaldehyde-Assisted Isolation of Regulatory elements (FAIRE-seq), and Chromatin Immunoprecipitation (ChIP-seq) .

For data usage terms and conditions, please refer to and
Overall design These were processed on Affymetrix Exon 1.0 ST arrays to obtain expression data from all cell types being analyzed for open chromatin.
Web link
Contributor(s) Crawford G, Iyer V, Lieb J, Birney E, Furey T
Citation(s) 20299549, 22955617
BioProject PRJNA30709
Submission date Apr 23, 2009
Last update date Jan 25, 2013
Contact name Sridar V Chittur
Phone 518-591-7215
Organization name SUNY-University at Albany
Department Center for Functional Genomics
Lab Microarray Core
Street address One Discovery Drive, CRC 342G
City Rensselaer
State/province NY
ZIP/Postal code 12144
Country USA
Platforms (1)
GPL15997 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [GENCODE v10]
Samples (155)
GSM993449 8988T_B1
GSM993450 8988T_B2
GSM993451 A549_B1

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE15805_RAW.tar 3.5 Gb (http)(custom) TAR (of BED, CEL)
Processed data provided as supplementary file

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