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Series GSE157925 Query DataSets for GSE157925
Status Public on Mar 31, 2021
Title Gut Microbe-Targeted Choline Trimethylamine Lyase Inhibitors Improves Obesity Via Rewiring of Host Circadian Rhythms.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The increasing prevalence of obesity and related metabolic disorders represents a growing public health concern. Despite advances in other areas of medicine, a safe and effective drug treatment for obesity has been elusive. Obesity has repeatedly been linked to reorganization of the gut microbiome 1-4 , yet to this point obesity therapeutics have been targeted exclusively toward the human host. Here we show that gut microbe-targeted inhibition of the metaorganismal trimethylamine N-oxide (TMAO) pathway protects mice against the metabolic disturbances associated with diet-induced obesity (DIO) or leptin deficiency (ob/ob). Selective small molecule inhibition of the gut microbial enzyme choline TMA-lyase (CutC) does not significantly reduce food intake, but instead is associated with beneficial remodeling of the gut microbiome, improvement in glucose tolerance, and enhanced energy expenditure. Leveraging untargeted metabolomics we discovered that CutC inhibition is associated with reorganization of host circadian control of both phosphatidylcholine and energy metabolism. Collectively, this study underscores the close relationship between microbe and host metabolism, and provides evidence that gut microbe-derived trimethylamine (TMA) is a key regulator of the host circadian clock. This work also demonstrates that gut microbe-targeted enzyme inhibitors can have profound effects on host energy metabolism, and have untapped potential as anti-obesity therapeutics.
 
Overall design All animals were on a 60% high fat diet leading into the study. One group (n=5) was maintained as vehicle cohort. The other group (n=6) was maintained on IMC (specific inhibitor of choline conversion to TMA). We analyzed n = 6 per Vehicle group, however one of the control samples did not meet QC standards and was dropped from the study.
 
Contributor(s) Brown JM, Schugar R, Gliniak C, Neumann C
Citation(s) 35072627
Submission date Sep 14, 2020
Last update date Feb 08, 2022
Contact name Chase Neumann
E-mail(s) ckn12@case.edu
Phone 2164401104
Organization name CCF
Street address 99089 Carnegie Ave
City Cleveland
State/province OH
ZIP/Postal code 44195
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (11)
GSM4780976 RCS_2
GSM4780977 RCS_3
GSM4780978 RCS_4
Relations
BioProject PRJNA663343
SRA SRP282353

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Supplementary file Size Download File type/resource
GSE157925_GEO_RCS_adipose_de.csv.gz 1.1 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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