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Series GSE157139 Query DataSets for GSE157139
Status Public on Feb 06, 2022
Title CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters
Organisms Mus musculus; synthetic construct
Experiment type Expression profiling by high throughput sequencing
Other
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35145304
Submission date Aug 30, 2020
Last update date Feb 15, 2022
Contact name Danny Reinberg
E-mail(s) Danny.Reinberg@nyulangone.org
Phone 212-263-9036
Organization name New York University School of Medicine
Department Biochemistry
Lab Reinberg Lab
Street address 522 First Avenue, 2nd floor, Room 211
City New York
State/province New York
ZIP/Postal code 10016
Country USA
 
Platforms (4)
GPL17769 Illumina MiSeq (synthetic construct)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (138)
GSM4754919 Hi-C_WT_E14_ESC_rep1
GSM4754920 Hi-C_WT_E14_ESC_rep2
GSM4754921 Hi-C_Maz_KO_ESC_rep1
This SuperSeries is composed of the following SubSeries:
GSE157136 CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters [Hi-C]
GSE157137 CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters [MAZ KO]
GSE157138 CRISPR and biochemical screens identify MAZ as a co-factor in CTCF-mediated insulation at Hox clusters [MAZ motif deletion RNA-seq]
Relations
BioProject PRJNA660247

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157139_RAW.tar 12.6 Gb (http)(custom) TAR (of BEDGRAPH, BW, HIC, NARROWPEAK, TXT)
SRA Run SelectorHelp

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