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Series GSE157095 Query DataSets for GSE157095
Status Public on Sep 06, 2022
Title Targeting KDM4B to disrupt the core regulatory transcription network governed by PAX3-FOXO1 in high-risk rhabdomyosarcoma
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35857643
Submission date Aug 28, 2020
Last update date Sep 07, 2022
Contact name Hongjian Jin
E-mail(s) hongjian.jin@STJUDE.ORG
Organization name St Jude Children's Research Hospital
Department Center for Applied Bioinformatics
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38015
Country USA
 
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (104)
GSM4752842 ATAC-LHCN-Ctrl-1
GSM4752843 ATAC-LHCN-Ctrl-2
GSM4752844 ATAC-LHCN-P3F1-OE-1
This SuperSeries is composed of the following SubSeries:
GSE157092 Targeting KDM4B to disrupt the core regulatory transcription network governed by PAX3-FOXO1 in high-risk rhabdomyosarcoma [ATAC-seq]
GSE157093 Targeting KDM4B to disrupt the core regulatory transcription network governed by PAX3-FOXO1 in high-risk rhabdomyosarcoma [CUT&RUN]
GSE157094 Targeting KDM4B to disrupt the core regulatory transcription network governed by PAX3-FOXO1 in high-risk rhabdomyosarcoma [ChIP-seq]
Relations
BioProject PRJNA660045

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157095_RAW.tar 17.6 Gb (http)(custom) TAR (of BED, BW, NARROWPEAK, TXT)
SRA Run SelectorHelp
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