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GEO accession:
Series GSE156478
Query DataSets for GSE156478
Status
Public on Sep 08, 2020
Title
High throughput joint profiling of chromatin accessibility and protein levels in single cells
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34083792
Submission date
Aug 19, 2020
Last update date
Aug 13, 2021
Contact name
Caleb Lareau
E-mail(s)
lareauc@mskcc.org
Organization name
Memorial Sloan Kettering
Street address
417 E 68th St, Zuckerman - ZRC 1132
City
New York
State/province
New York
ZIP/Postal code
10065
Country
USA
Platforms (3)
GPL21697
NextSeq 550 (Homo sapiens)
GPL24625
NextSeq 550 (Homo sapiens; Mus musculus)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (52)
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GSM4732109
CD28_CD3_control_ASAP_ATAC
GSM4732110
CD28_CD3_control_ASAP_ADT
GSM4732111
CD28_CD3_stim_ASAP_ATAC
GSM4732112
CD28_CD3_stim_ASAP_ADT
GSM4732113
CD28_CD3_control_CITE_GEX
GSM4732114
CD28_CD3_control_CITE_ADT
GSM4732115
CD28_CD3_stim_CITE_GEX
GSM4732116
CD28_CD3_stim_CITE_ADT
GSM4732117
AvsB_ATAC_LLL
GSM4732118
AvsB_ATAC_OMNI
GSM4732119
AvsB_TSA_LLL
GSM4732120
AvsB_TSA_OMNI
GSM4732121
AvsB_TSB_LLL
GSM4732122
AvsB_TSB_OMNI
GSM4732123
Broad_LibA_ATAC
GSM4732124
Broad_LibB_ADT
GSM4732125
Broad_LibB_ATAC
GSM4732126
Broad_LibC_ATAC
GSM4732127
Broad_LibC_HTO
GSM4732128
Intra_ATAC
GSM4732129
Intra_TSA
GSM4732130
Intra_TSB
GSM4732131
SpeciesMix1_ADT
GSM4732132
SpeciesMix1_ATAC
GSM4732133
SpeciesMix2_ADT
GSM4732134
SpeciesMix2_ATAC
GSM4732135
Perturb_CD4_stim_AD1
GSM4732136
Perturb_CD4_stim_AD2
GSM4732137
Perturb_CD4_stim_ATAC
GSM4732138
Perturb_CD4_stim_HT1
GSM4732139
Perturb_CD4_stim_HT2
GSM4732140
Human_BoneMarrow_ATAC
GSM4732141
Human_BoneMarrow_ADT
GSM4732142
Human_BoneMarrow_HTO
GSM5065524
CD28_CD3_LLL_control_Multiome_ATAC
GSM5065525
CD28_CD3_LLL_control_Multiome_RNA
GSM5065526
CD28_CD3_LLL_control_Multiome_ADT
GSM5065527
CD28_CD3_LLL_stim_Multiome_ATAC
GSM5065528
CD28_CD3_LLL_stim_Multiome_RNA
GSM5065529
CD28_CD3_LLL_stim_Multiome_ADT
GSM5065530
CD28_CD3_DIG_control_Multiome_ATAC
GSM5065531
CD28_CD3_DIG_control_Multiome_RNA
GSM5065532
CD28_CD3_DIG_control_Multiome_ADT
GSM5065533
CD28_CD3_DIG_stim_Multiome_ATAC
GSM5065534
CD28_CD3_DIG_stim_Multiome_RNA
GSM5065535
CD28_CD3_DIG_stim_Multiome_ADT
GSM5065640
Perturb_CD4_stim_intra_C6_ADT
GSM5065641
Perturb_CD4_stim_intra_D6_ADT
GSM5065642
Perturb_CD4_stim_intra_C6_ATAC
GSM5065643
Perturb_CD4_stim_intra_D6_ATAC
GSM5065644
Perturb_CD4_stim_intra_C6_HTO
GSM5065645
Perturb_CD4_stim_intra_D6_HTO
This SuperSeries is composed of the following SubSeries:
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More...
GSE156473
High throughput joint profiling of chromatin accessibility and protein levels in single cells [PBMC stimulation]
GSE156474
High throughput joint profiling of chromatin accessibility and protein levels in single cells [PBMCs]
GSE156475
High throughput joint profiling of chromatin accessibility and protein levels in single cells [Species mix]
GSE156476
High throughput joint profiling of chromatin accessibility and protein levels in single cells [Tcell KO]
GSE156477
High throughput joint profiling of chromatin accessibility and protein levels in single cells [marrow]
GSE166188
High throughput joint profiling of chromatin accessibility and protein levels in single cells [PBMC_Stim_Multiome]
GSE166191
High throughput joint profiling of chromatin accessibility and protein levels in single cells [Tcell_Intra]
Relations
BioProject
PRJNA658075
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
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TXT
Supplementary file
Size
Download
File type/resource
GSE156478_RAW.tar
19.4 Gb
(http)
(custom)
TAR (of CSV, MTX, TSV, TXT)
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