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| Status |
Public on Dec 08, 2020 |
| Title |
Common and private vitamin D target genes of human primary immune cells: a personalized approach |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
In this study, the transcriptome of peripheral blood mononuclear cells (PBMCs) of healthy adults was investigated in response to in vitro treatment with 1,25(OH)2D3.
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| Overall design |
RNA-seq of PBMCs of 5 individuals (#5, 9,12,13,14) treated in 3 biologial repeats with the biologically active form of vitamin D, 1,25(OH)2D3 (1,25D) or solvent (0.1% Ethanol (EtOH))
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| Contributor(s) |
Carlberg C, Neme A, Hanel A |
| Citation(s) |
33273683 |
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| Submission date |
Aug 12, 2020 |
| Last update date |
Jul 01, 2021 |
| Contact name |
Carsten Carlberg |
| E-mail(s) |
c.carlberg@pan.olsztyn.pl, carsten.carlberg@uef.fi, carsten.carlberg@gmail.com
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| Phone |
+358-40-355-3062
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| Organization name |
Polish Academy of Sciences
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| Department |
Food Research
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| Street address |
ul. Trylińskiego 18
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| City |
Olsztyn |
| ZIP/Postal code |
10-683 |
| Country |
Poland |
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| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
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| Samples (30)
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| GSM4725044 |
Individual #5, EtOH, rep1 |
| GSM4725045 |
Individual #5, EtOH, rep2 |
| GSM4725046 |
Individual #5, EtOH, rep3 |
| GSM4725047 |
Individual #9, 125D, rep1 |
| GSM4725048 |
Individual #9, 125D, rep2 |
| GSM4725049 |
Individual #9, 125D, rep3 |
| GSM4725050 |
Individual #9, EtOH, rep1 |
| GSM4725051 |
Individual #9, EtOH, rep2 |
| GSM4725052 |
Individual #9, EtOH, rep3 |
| GSM4725053 |
Individual #12, 125D, rep1 |
| GSM4725054 |
Individual #12, 125D, rep2 |
| GSM4725055 |
Individual #12, 125D, rep3 |
| GSM4725056 |
Individual #12, EtOH, rep1 |
| GSM4725057 |
Individual #12, EtOH, rep2 |
| GSM4725058 |
Individual #12, EtOH, rep3 |
| GSM4725059 |
Individual #13, 125D, rep1 |
| GSM4725060 |
Individual #13, 125D, rep2 |
| GSM4725061 |
Individual #13, 125D, rep3 |
| GSM4725062 |
Individual #13, EtOH, rep1 |
| GSM4725063 |
Individual #13, EtOH, rep2 |
| GSM4725064 |
Individual #13, EtOH, rep3 |
| GSM4725065 |
Individual #14, 125D, rep1 |
| GSM4725066 |
Individual #14, 125D, rep2 |
| GSM4725067 |
Individual #14, 125D, rep3 |
| GSM4725068 |
Individual #14, EtOH, rep1 |
| GSM4725069 |
Individual #14, EtOH, rep2 |
| GSM4725070 |
Individual #14, EtOH, rep3 |
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| Relations |
| BioProject |
PRJNA656814 |
| SRA |
SRP277224 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE156124_Processed_data.xlsx |
16.8 Mb |
(ftp)(http) |
XLSX |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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