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Series GSE155787 Query DataSets for GSE155787
Status Public on May 04, 2022
Title RNA-seq reveals differential expression of potential miR-486 target transcripts
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Identifying microRNA target transcripts is critical in understanding their role in modulation of disease pathology through cellular processes. Here, we used isolated 6 month mouse tibialis anterior (TA) muscle tissue for RNA extraction and sequencing in order to identify mRNA transcripts overexpressed in miR-486 knockout mice compared to wildtype.
 
Overall design Tibialis anterior muscle transcriptomic profiles of 6 month male miR-486 knockout (KO) and wildtype (WT) mice were generated in triplicate.
 
Contributor(s) Hightower RM, Alexander MS
Citation(s) 35512829
https://doi.org/10.1101/2021.06.14.448387
Submission date Aug 06, 2020
Last update date Jun 01, 2022
Contact name Matthew Alexander
E-mail(s) malexander@peds.uab.edu
Organization name University of Alabama at Birmingham
Department Pediatrics
Lab Matthew Alexander
Street address 1918 University Blvd. MCLM 465 Box# 96
City Birmingham
State/province AL
ZIP/Postal code 35294
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (7)
GSM4712070 WT 1
GSM4712071 WT 2
GSM4712072 WT 3
Relations
BioProject PRJNA655625
SRA SRP276364

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE155787_rawCounts.xlsx 1.9 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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