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Series GSE155340 Query DataSets for GSE155340
Status Public on Aug 21, 2020
Title Targeting Piezo1 Unleashes Innate Immunity Against Cancer and Infectious Disease
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Piezo1 is a mechanosensitive ion channel that has gained recognition for its role in regulating diverse physiological processes. However, the influence of Piezo1 in inflammatory disease, including infection and tumor-immunity, is not well-studied. We postulated that Piezo1 links physical forces to immune regulation in myeloid cells. We discovered signal transduction via Piezo1 in myeloid cells and established this channel as the primary sensor of mechanical stress in these cells. Global inhibition of Piezo1 was protective against both cancer and septic shock and resulted in a diminution in suppressive myeloid cells. Moreover, deletion of Piezo1 in myeloid cells protected against cancer and increased survival in poly-microbial sepsis. Mechanistically, we show that mechanical stimulation promotes Piezo1-dependent myeloid cell expansion by suppressing Rb. We further show Piezo1-mediated silencing of Rb is regulated via upregulation of HDAC2. Collectively, our work uncovers Piezo1 as a targetable immune checkpoint that drives immune-suppressive myelopoiesis in cancer and infectious disease.
 
Overall design For single cell Seq and ChIP-Seq experiments, mouse Piezo1f/f;LyzMCre and Piezo1f/f bone marrow cells were negatively enriched for CD3-CD19-Ter119- cells using FACS-sorting.
 
Contributor(s) Aykut B, Khodadadi-Jamayran A, Miller G
Citation(s) 32826342
Submission date Jul 29, 2020
Last update date Nov 20, 2020
Contact name Alireza Khodadadi-Jamayran
Organization name New York University, NYU Langone Medical Center
Department Division of Advanced Research Technologies (DART)
Lab Applied Bioinformatics Laboratories (ABL)
Street address 550 1st Ave, MSB 304
City New York City
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (10)
GSM4699490 ChIP-Seq_ChIP LY2M2_ChIP-Seq
GSM4699491 ChIP-Seq_ChIP LyzMCre
GSM4699492 ChIP-Seq_Input LyzM2
Relations
BioProject PRJNA649429
SRA SRP274087

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Supplementary file Size Download File type/resource
GSE155340_RAW.tar 1.5 Gb (http)(custom) TAR (of BW, MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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