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Series GSE154831 Query DataSets for GSE154831
Status Public on Jul 11, 2022
Title Overlap Between Pediatric Nodal Marginal Zone Lymphoma (PNMZL) and Pediatric-Type Follicular Lymphoma (PTFL) : Morphological and Molecular Analysis (OncoScan)
Platform organisms Homo sapiens; Capra hircus; Mus musculus; Cavia porcellus; Ignicoccus hospitalis
Sample organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary Pediatric nodal marginal zone lymphoma (PNMZL) is an unusual and poorly understood primary B-cell nodal neoplasms. Patients are predominantly young males presenting with localized disease. The tumor shows overlapping morphological features with pediatric-type follicular lympgoma. The alterations involved in the pathogenesis of PNMZL are not known.
 
Overall design The aim of this study was to perform a complete genetic characterization of PNMZL. Fifty-two cases (47 males and 5 females; mean age: 17.5 years, range 5-48) were analyzed by copy number (CN) array and next-generation sequencing analyses as whole-exome sequencing and targeted sequencing investigating the state of genes associated with close related entities like adult NMZL, pediatric-type and adult follicular lymphoma.
 
Contributor(s) Salmeron-Villalobos J, Salaverria I, Quintanilla-Martinez L
Citation(s) 35609565
Submission date Jul 21, 2020
Last update date Jul 14, 2022
Contact name Itziar Salaverria
E-mail(s) isalaver@clinic.cat
Organization name Hospital Clínic
Street address Rossello 153
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platforms (6)
GPL18602 [OncoScan] Affymetrix OncoScan FFPE Assay
GPL18603 Illumina Hiseq 1000 (Mus musculus)
GPL18604 OpArray Human 35K [oligo_ID version]
Samples (53)
GSM4681297 Pediatric Nodal marginal zone lymphoma 1
GSM4681298 Pediatric Nodal marginal zone lymphoma 2
GSM4681299 Pediatric Nodal marginal zone lymphoma 3
This SubSeries is part of SuperSeries:
GSE154834 Overlap Between Pediatric Nodal Marginal Zone Lymphoma (PNMZL) and Pediatric-Type Follicular Lymphoma (PTFL) : Morphological and Molecular Analysis
Relations
BioProject PRJNA746078

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE154831_RAW.tar 1.3 Gb (http)(custom) TAR (of CEL, OSCHP)
Processed data provided as supplementary file
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