|
| Status |
Public on Jul 01, 2020 |
| Title |
Single Cell RNA Sequencing of neonatal and juvenile mice skin (wound and unwounded) |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We perform 10X Genomics scRNA-Seq on P2, P21, P2 + 7 days post wound, P21 + 7 days post wound, with 3 bioreplicates for each condition. Fastq files and output folders were generated from Cellranger pipeline. Loom files were generated using Velocyto.py for downstream analysis. Chemistry: V2
|
| |
|
| Overall design |
scRNA-Seq on P2, P21, P2 7 days post wound, P21 7 days post wound, with 3 bioreplicates for each condition
|
| Web link |
https://pubmed.ncbi.nlm.nih.gov/32990218/
|
| |
|
| Contributor(s) |
Driskell RR, Phan QM |
| Citation(s) |
32990218 |
| BioProject |
PRJNA641873 |
| |
| Submission date |
Jun 30, 2020 |
| Last update date |
Feb 05, 2024 |
| Contact name |
Ryan Roy Driskell |
| E-mail(s) |
ryan.driskell@wsu.edu
|
| Phone |
5093353807
|
| Organization name |
Washington State University
|
| Department |
Molecular Biosciences
|
| Lab |
Driskell
|
| Street address |
100 Dairy Rd. BLS 202A
|
| City |
Pullman |
| State/province |
Washington |
| ZIP/Postal code |
99164 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
|
| Samples (12)
|
|
| Relations |
| SRA |
SRP268815 |
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