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Series GSE152765 Query DataSets for GSE152765
Status Public on Nov 30, 2020
Title Metabolic programming drives proximal tubule differentiation and kidney dysfunction
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Renal disease development is poorly understood, mostly because the kidney is made up of more than 20 different cell types, each of them with specific function and complex interaction. Here, we used single cell RNA sequencing to resolve cell-type specific and cell fraction changes
 
Overall design Single-cell RNA-seq of engineered human kidney organoids
Web link https://doi.org/10.1016/j.cmet.2020.11.011
 
Contributor(s) Park J, Dhillon P, Hurtado C, Li L, Huang S, Kang H, Shrestra R, Chatterjee S, Prado P, Han S, Liu H, Xin S, Bartmanov K, Romero JP, Prosper F, Li M, Pei L, Kim J, Montserrat N, Susztak K
Citation(s) 33301705
Submission date Jun 18, 2020
Last update date Mar 07, 2021
Contact name Juan Pablo Romero
E-mail(s) jromeror@unav.es
Organization name CIMA
Department Hemato-Oncology
Lab Advanced Genomics
Street address Av. de Pío XII, 55
City Pamplona
State/province Navarra
ZIP/Postal code 31008
Country Spain
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (1)
GSM4625992 Engineered Human Kidney Organoids (scRNA-seq)
Relations
BioProject PRJNA640369
SRA SRP267854

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE152765_RAW.tar 64.8 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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