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Series GSE152759 Query DataSets for GSE152759
Status Public on Jul 28, 2020
Title Bulk RNA-seq data to assess an improved zebrafish transcriptome annotation
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary oligo-dT and random primed RNA-seq libraries were used to test an improved annotation of the zebrafish transcriptome
Overall design RNA-seq was performed on transgene-positive cells isolated by FACS
Contributor(s) Lawson N
Citation(s) 32831172
NIH grant(s)
Grant ID Grant title Affiliation Name
R21 NS105654 Identification of blood-brain-barrier pericyte-specific cis regulatory elements UNIV OF MASSACHUSETTS MED SCHOOL NATHAN D LAWSON
R35 HL140017 Embryonic origins of endothelial heterogeneity UNIV OF MASSACHUSETTS MED SCHOOL NATHAN D LAWSON
Submission date Jun 18, 2020
Last update date Sep 21, 2020
Contact name Nathan D. Lawson
Organization name University of Massachusetts Medical School
Department Molecular, Cell, and Cancer Biology
Street address 364 Plantation Street
City Worcester
State/province MA
ZIP/Postal code 01605
Country USA
Platforms (1)
GPL14875 Illumina HiSeq 2000 (Danio rerio)
Samples (12)
GSM4625921 pdgfrb-negative rep1
GSM4625922 pdgfrb-negative rep2
GSM4625923 pdgfrb-negative rep3
BioProject PRJNA640350
SRA SRP267842

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE152759_Nr2f2_Ens95.csv.gz 1.7 Mb (ftp)(http) CSV
GSE152759_Nr2f2_RefSeq.csv.gz 1.8 Mb (ftp)(http) CSV
GSE152759_pdgfrbCit_Ens95.csv.gz 2.0 Mb (ftp)(http) CSV
GSE152759_pdgfrbCit_RefSeq.csv.gz 2.1 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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