NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE152646 Query DataSets for GSE152646
Status Public on Jun 16, 2023
Title Molecular analysis in SADBE-induced ACD (Allergic contact dermatitis) model
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The mechanisms underlying pruritus of SADBE induced ACD (Allergic contact dermatitis) remain poorly understood,due to limited clinical data and animal studies. In this study, we investigated whether there are certain key signaling molecules downstream of the recently identified peptides mediating itch in the spinal cord. We investigated the changes in the trascriptome by performing RNAseq of cervical spinal cords in control and SADBE induced ACD model. Our study represents the detailed analysis of transcriptomes of spinal cord in chronic itch model with biologic replicates, generated by RNA-seq technology.
 
Overall design six mice (3 controls and 3 ACD) were sacrificed. Cervical spinal cord isolation is followed by RNA extraction of single samples, library preparation and sequencing.
 
Contributor(s) Liu X, Wang Y, Wang D, Wen Y, Tao A
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 17, 2020
Last update date Jun 18, 2023
Contact name Xueting Liu
E-mail(s) xuetingliu2019@126.com
Organization name The Second Affiliated Hospital of Guangzhou Medical University
Lab Guangdong Provincial Key Laboratory of Allergy & Clinical Immunology
Street address Changgangdong 250
City Guangzhou
ZIP/Postal code 510260
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM4622801 C5_SC
GSM4622802 C6_SC
GSM4622803 C7_SC
Relations
BioProject PRJNA639957
SRA SRP267622

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE152646_RAW.tar 1.9 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap