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| Status |
Public on Jun 20, 2020 |
| Title |
Identification of GLYMA.04G093300 binding sites in soybean early maturation embryos |
| Organism |
Glycine max |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
To dissect the gene regulatory networks operating during soybean embryo development, we identified the binding sites genome-wide for transcription factor GLYMA.04G093300 in early maturation embryos using ChIP-seq.
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| Overall design |
Identification of GLYMA.04G093300 binding sites in soybean embryos at the early maturation stage. ChIP and total chromatin controls (input) were obtained for two biological replicates, using two different antibodies. A total of 6 samples were sequenced using the Illumina HiSeq2500 platform.
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| Contributor(s) |
Pelletier J, Jo L, Uzawa R, Chen M, Golberg RB, Harada JJ |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 11, 2020 |
| Last update date |
Jun 21, 2020 |
| Contact name |
John Harada |
| E-mail(s) |
jjharada@ucdavis.edu
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| Organization name |
University of California
|
| Department |
Plant Biology
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| Lab |
Harada lab
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| Street address |
One Shields Avenue
|
| City |
Davis |
| State/province |
CA |
| ZIP/Postal code |
95616 |
| Country |
USA |
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| Platforms (1) |
| GPL19246 |
Illumina HiSeq 2500 (Glycine max) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA638949 |
| SRA |
SRP266974 |
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