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| Status |
Public on Jan 31, 2021 |
| Title |
NdpA2 & TprA regulon in PA14: ICE PAPI-1 transference induced (M0) vs PAPI-1 transference inactivated (M0-59060-stop) |
| Organism |
Pseudomonas aeruginosa |
| Experiment type |
Expression profiling by array
|
| Summary |
Transcriptional profiling of Pseudomonas aeruginosa PA14 comparing T4SS-GI induced biosynthesis M0 strain with control T4SS-GI induced biosynthesis M0-59060-stop strain.
The PA14_59050-59120 locus was overexpressed through chromosomal insertion of ptac promoter within PA14_59030 gene.
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| Overall design |
Two-condition experiment, M0 vs. M0-59060-stop PA14 strains. Biological replicates: 3 PAPI-1 inactivated transference replicates, 3 PAPI-1 induced transference replicates.
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| Contributor(s) |
Dangla-Pélissier G, Roux N, Schmidt V, Chambonnier G, Ba M, Sebban-Kreuzer C, de Bentzmann S, Giraud C, Bordi C |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 09, 2020 |
| Last update date |
Feb 01, 2021 |
| Contact name |
Gauthier Dangla-Pélissier |
| E-mail(s) |
g.dangla.pelissier@gmail.com
|
| Organization name |
CNRS
|
| Department |
IMM
|
| Lab |
LISM-UMR7255
|
| Street address |
31 chemin Joseph Aiguier
|
| City |
Marseille cedex 20 |
| State/province |
PACA |
| ZIP/Postal code |
13402 |
| Country |
France |
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| Platforms (1) |
| GPL28653 |
Agilent-028939 UPR9027-IFR88-Paeruginosa_v1 |
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| Samples (3) |
| GSM4604657 |
M0 strain vs M0∆tprA strain Replicate 1 |
| GSM4604658 |
M0 strain vs M0∆tprA strain Replicate 2 |
| GSM4604659 |
M0 strain vs M0∆tprA strain Replicate 3 |
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| Relations |
| BioProject |
PRJNA638396 |
