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Series GSE151761 Query DataSets for GSE151761
Status Public on Jun 04, 2020
Title Innovations in primate interneuron repertoire
Organisms Callithrix jacchus; Macaca mulatta; Homo sapiens; Mustela putorius furo; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report single-nucleus transcriptomes from brain regions in 5 species: mice: Frontal Cortex, V1, Hippocampus, Striatum; common marmoset: 7 neocortical regions, Hippocampus, Striatum (Nucleus Accumbens, Caudate, Putamen); rhesus macaque: Prefrontal Cortex, V1; human: Prefrontal Cortex, V1, Striatum (Caudate); ferret: Prefrontal Cortex, V1, Striatum
 
Overall design Single-nucleus suspensions were made from frozen brain tissue and sampled with Drop-seq or 10X 3' v3 chemistry.
 
Contributor(s) Krienen FM, McCarroll SA
Citation(s) 32999462
Submission date Jun 03, 2020
Last update date Apr 20, 2022
Contact name Fenna Marie Krienen
E-mail(s) fennak@gmail.com, fenna_krienen@hms.harvard.edu
Organization name Harvard Medical School
Department Genetics
Lab McCarroll
Street address 77 Ave Louis Pasteur, NRB 260
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (8)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (123)
GSM4589993 D1S2.122316.BB
GSM4589994 D1S2.121616.1
GSM4589995 D1S2.121616.2A
Relations
BioProject PRJNA637106
SRA SRP265861

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE151761_F_GRCm38.81.P60Hippocampus.raw.dge.txt.gz 423.7 Mb (ftp)(http) TXT
GSE151761_F_GRCm38.81.P60Striatum.raw.dge.txt.gz 269.4 Mb (ftp)(http) TXT
GSE151761_adHumInt.raw.dge.txt.gz 207.3 Mb (ftp)(http) TXT
GSE151761_ferret.ctx.int.raw.dge.txt.gz 42.9 Mb (ftp)(http) TXT
GSE151761_ferret.str.int.raw.dge.txt.gz 6.0 Mb (ftp)(http) TXT
GSE151761_hum.str.int.10X.raw.dge.txt.gz 11.7 Mb (ftp)(http) TXT
GSE151761_hum.str.int.DS.raw.dge.txt.gz 10.9 Mb (ftp)(http) TXT
GSE151761_marm.ctx.int.DS.raw.dge.txt.gz 269.5 Mb (ftp)(http) TXT
GSE151761_marm.hippo.int.raw.dge.txt.gz 43.1 Mb (ftp)(http) TXT
GSE151761_marm.str.int.10X.raw.dge.txt.gz 35.4 Mb (ftp)(http) TXT
GSE151761_marm.str.int.DS.raw.dge.txt.gz 17.4 Mb (ftp)(http) TXT
GSE151761_mouse.nuc.cortical_interneurons.raw.dge.txt.gz 22.9 Mb (ftp)(http) TXT
GSE151761_mq.ctx.int.raw.dge.txt.gz 64.3 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record
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