|
| Status |
Public on Sep 15, 2021 |
| Title |
Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma [tfap2a/e] |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report how the ZMEL1-PRO cell line changes following CRISPR-Cas9 inactivation of tfap2a and tfap2e
|
| |
|
| Overall design |
RNA-seq of ZMEL1-PRO zebrafish melanoma cells following CRISPR-Cas9 with either tfap2a and tfap2e sgRNA or non-targeting control sgRNA (N=3 replicate samples each)
|
| |
|
| Contributor(s) |
Campbell NR, Xavier JB, White RM |
| Citation(s) |
34529939 |
| Submission date |
Jun 02, 2020 |
| Last update date |
Sep 26, 2021 |
| Contact name |
Nathaniel R Campbell |
| Organization name |
Memorial Sloan Kettering Cancer Center
|
| Street address |
417 E 68th St, Z-1325
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL18413 |
Illumina HiSeq 2500 (Danio rerio) |
|
| Samples (6)
|
|
| This SubSeries is part of SuperSeries: |
| GSE151679 |
Cell state diversity promotes metastasis through heterotypic cluster formation in melanoma |
|
| Relations |
| BioProject |
PRJNA636816 |
| SRA |
SRP265663 |
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