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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Nov 18, 2020 |
| Title |
CRISPR-GEMM pooled mutagenic screening identifies KMT2D as a major modulator of immune checkpoint blockade |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
32887696 |
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| Submission date |
May 26, 2020 |
| Last update date |
Nov 18, 2020 |
| Contact name |
Ryan D Chow |
| E-mail(s) |
ryan.chow@yale.edu
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| Organization name |
Yale University
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| Street address |
850 West Campus Drive
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| City |
West Haven |
| State/province |
CT |
| ZIP/Postal code |
06516 |
| Country |
USA |
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| Platforms (2) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (18)
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| GSM4568823 |
MA1L liver tumor cells transduced with sgKmt2d, replicate 1 |
| GSM4568824 |
MA1L liver tumor cells transduced with sgKmt2d, replicate 2 |
| GSM4568825 |
MA1L liver tumor cells transduced with sgKmt2d, replicate 3 |
| GSM4568826 |
MA1L liver tumor cells transduced with vector control, replicate 1 |
| GSM4568827 |
MA1L liver tumor cells transduced with vector control, replicate 2 |
| GSM4568828 |
MA1L liver tumor cells transduced with vector control, replicate 3 |
| GSM4568829 |
ATACseq of MA1L_vector, 0_IFNG replicate 1 |
| GSM4568830 |
ATACseq of MA1L_vector, 0_IFNG replicate 2 |
| GSM4568831 |
ATACseq of MA1L_vector, 0_IFNG replicate 3 |
| GSM4568832 |
ATACseq of MA1L_vector, 10_IFNG replicate 1 |
| GSM4568833 |
ATACseq of MA1L_vector, 10_IFNG replicate 2 |
| GSM4568834 |
ATACseq of MA1L_vector, 10_IFNG replicate 3 |
| GSM4568835 |
ATACseq of MA1L_sgKmt2d, 0_IFNG replicate 1 |
| GSM4568836 |
ATACseq of MA1L_sgKmt2d, 0_IFNG replicate 2 |
| GSM4568837 |
ATACseq of MA1L_sgKmt2d, 0_IFNG replicate 3 |
| GSM4568838 |
ATACseq of MA1L_sgKmt2d, 10_IFNG replicate 1 |
| GSM4568839 |
ATACseq of MA1L_sgKmt2d, 10_IFNG replicate 2 |
| GSM4568840 |
ATACseq of MA1L_sgKmt2d, 10_IFNG replicate 3 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE151225 |
CRISPR-GEMM pooled mutagenic screening identifies KMT2D as a major modulator of immune checkpoint blockade (RNA-Seq) |
| GSE151226 |
CRISPR-GEMM pooled mutagenic screening identifies KMT2D as a major modulator of immune checkpoint blockade (ATAC-Seq) |
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| Relations |
| BioProject |
PRJNA635149 |
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