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Series GSE15093 Query DataSets for GSE15093
Status Public on Aug 15, 2009
Title CGH data from AID WT vs AID KO BCR-ABL1 mouse leukemia cells
Organism Mus musculus
Experiment type Genome variation profiling by genome tiling array
Summary Activation-induced cytidine deaminase (AID) specific amplifications and deletions in BCR-ABL1 positive Leukemia mouse cells.

Bone marrow from Balb/CJ WT and Balb/CJ AID KO mice was transduced with BCR-ABL1. The AID specific amplifications and deletions where analyzed with an Agilent 244A mouse whole Genome CGH Array.
 
Overall design The AID specific amplifications and deletions where analyzed with an Agilent 244A mouse whole Genome CGH Array.
3 WT samples where compared to AID KO samples.

1.) WT MIG1_Cy5 vs KO MIG_Cy3
2.) WT MIG2_Cy5 vs KO MIG_Cy3
3.) WT MIG3_Cy5 vs KO MIG_Cy3
 
Citation(s) 19732723
Submission date Mar 04, 2009
Last update date Jan 17, 2013
Contact name Markus Müschen
E-mail mmuschen@chla.usc.edu
Phone + 1 323 361 5592
Fax +1 323 361 1516
URL http://www.lymphocytes.de/
Organization name University of Southern California
Department Childrens Hospital Los Angeles
Lab Müschen Lab
Street address 4650 Sunset Blvd
City Los Angeles
State/province CA
ZIP/Postal code 90027
Country USA
 
Platforms (1)
GPL8250 University of Southern California/Agilent Mouse Genome CGH Microarray 244A
Samples (3)
GSM377490 CGH data from AID WT1 vs AID KO BCR-ABL1 mouse leukemia cells
GSM377491 CGH data from AID WT2 vs AID KO BCR-ABL1 mouse leukemia cells
GSM377492 CGH data from AID WT3 vs AID KO BCR-ABL1 mouse leukemia cells
Relations
BioProject PRJNA114799

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE15093_RAW.tar 202.7 Mb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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