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Series GSE149938 Query DataSets for GSE149938
Status Public on Sep 17, 2020
Title Single-cell Transcriptomic Landscape of Human Blood Cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We profiled the transcriptomes of 7,643 human blood cells covering 32 immunophenotypic cell types across 21 healthy donors. We constructed the single-cell transcriptional atlas of blood cells on the basis of protein-coding genes and long noncoding RNAs (lncRNAs) respectively, and showed a high consistence between them. Notably, lncRNAs and novel transcription factors regulating hematopoietic cell differentiation were identified.
Overall design Single cell RNAseq for BM/PB-derived 32 blood cells, involving in the samples from GSE137864
Note from submitter: We stored the raw data in "Chinese Academy of Sciences". We still need to store our raw data into NCBI SRA, after we obtain the permit of China.
Web link
Contributor(s) Zhu P, Cheng T
Citation(s) 34691592
Submission date May 06, 2020
Last update date Oct 27, 2021
Contact name xiaowei xie
Organization name Institute of Hematology and Blood Diseases Hospital
Street address 288 Nanjing Road
City Tianjin
ZIP/Postal code 300020
Country China
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (6)
GSM4793029 B cell population
GSM4793030 NK cell population
GSM4793031 T cell population
BioProject PRJNA664104

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149938_RAW.tar 30.0 Kb (http)(custom) TAR (of TXT)
GSE149938_barcodes_for_B_NK_Mo_Neu.txt.gz 600 b (ftp)(http) TXT
GSE149938_barcodes_for_ery_T.txt.gz 617 b (ftp)(http) TXT
GSE149938_umi_matrix.csv.gz 38.2 Mb (ftp)(http) CSV
Processed data are available on Series record
Raw data not applicable for this record

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