|
| Status |
Public on Aug 10, 2020 |
| Title |
STAT5 is a pioneer factor for BATF-mediated plasticity at the Il9 locus [ChIP-Seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
BATF requires the STAT5 signal to mediate plasticity at the Il9 locus.
|
| |
|
| Overall design |
BATF binding in Th9 and Th17 cells.
|
| |
|
| Contributor(s) |
Kaplan M, Fu Y |
| Citation(s) |
32985505 |
| |
| Submission date |
Feb 19, 2020 |
| Last update date |
Oct 26, 2020 |
| Contact name |
Mark H Kaplan |
| E-mail(s) |
mkaplan2@iupui.edu
|
| Phone |
317-278-3696
|
| Organization name |
Indiana University
|
| Department |
Microbiology and Immunology
|
| Street address |
635 Barnhill Dr. MS 420
|
| City |
Indianapolis |
| State/province |
IN |
| ZIP/Postal code |
46202 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (12)
|
|
| This SubSeries is part of SuperSeries: |
| GSE145541 |
STAT5 promotes accessibility and is required for BATF-mediated plasticity at the Il9 locus |
|
| Relations |
| BioProject |
PRJNA607529 |
| SRA |
SRP250012 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE145540_BATF-1_IgG-1-BN2_macs2_peaks.narrowPeak.gz |
26.5 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-1_Input-1-BN2_macs2_peaks.narrowPeak.gz |
26.7 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-1_Input-IgG-1-BN2_macs2_peaks.narrowPeak.gz |
30.3 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-2_IgG-2-BN3_macs2_peaks.narrowPeak.gz |
4.5 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-2_Input-2-BN3_macs2_peaks.narrowPeak.gz |
4.7 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-2_Input-IgG-2-BN3_macs2_peaks.narrowPeak.gz |
5.2 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-3_IgG-3-BN4_macs2_peaks.narrowPeak.gz |
57.3 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-3_Input-3-BN4_macs2_peaks.narrowPeak.gz |
69.7 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-3_Input-IgG-3-BN4_macs2_peaks.narrowPeak.gz |
70.4 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-4_IgG-4-BN5_macs2_peaks.narrowPeak.gz |
4.2 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-4_Input-4-BN5_macs2_peaks.narrowPeak.gz |
3.7 Kb |
(ftp)(http) |
NARROWPEAK |
| GSE145540_BATF-4_Input-IgG-4-BN5_macs2_peaks.narrowPeak.gz |
4.0 Kb |
(ftp)(http) |
NARROWPEAK |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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