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GEO accession:
Series GSE141660
Query DataSets for GSE141660
Status
Public on Dec 28, 2022
Title
Changes in undifferentiated and differentiated human primary epithelial cells of antrum, corpus, and fundus
Organism
Homo sapiens
Experiment type
Expression profiling by array
Methylation profiling by genome tiling array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36585699
Submission date
Dec 09, 2019
Last update date
Jan 11, 2023
Contact name
Thomas F Meyer
E-mail(s)
tfm@mpiib-berlin.mpg.de
Phone
03028 460 404
Organization name
Max Planck Institute for Infection Biology
Department
Molecular Biology
Street address
Chariteplatz 1
City
Berlin
ZIP/Postal code
10117
Country
Germany
Platforms (3)
GPL16304
Illumina HumanMethylation450 BeadChip [UBC enhanced annotation v1.0]
GPL21145
Infinium MethylationEPIC
GPL23572
Agilent-048908 8x60K whole genome incl V1-V2 linc BioVacSafe final 048908 [Probe Name version]
Samples (46)
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GSM4210645
23-AU: Antrum_undifferentiated_rep1
GSM4210646
23-AD: Antrum_differentiated_rep1
GSM4210647
23-CU: Corpus_undifferentiated_rep1
GSM4210648
23-CD: Corpus_differentiated_rep1
GSM4210649
23-FU: Fundus_undifferentiated_rep1
GSM4210650
23-FD: Fundus_differentiated_rep1
GSM4210651
24-AU: Antrum_undifferentiated_rep2
GSM4210652
24-AD: Antrum_differentiated_rep2
GSM4210653
24-CU: Corpus_undifferentiated_rep2
GSM4210654
24-CD: Corpus_differentiated_rep2
GSM4210655
24-FU: Fundus_undifferentiated_rep2
GSM4210656
24-FD: Fundus_differentiated_rep2
GSM4210657
26-AU: Antrum_undifferentiated_rep3
GSM4210658
26-AD: Antrum_differentiated_rep3
GSM4210659
26-CU: Corpus_undifferentiated_rep3
GSM4210660
26-CD: Corpus_differentiated_rep3
GSM4210661
26-FU: Fundus_undifferentiated_rep3
GSM4210662
26-FD: Fundus_differentiated_rep3
GSM4210705
Antrum_undifferentiated_rep1 [methylation]
GSM4210706
Antrum_undifferentiated_rep2 [methylation]
GSM4210707
Antrum_undifferentiated_rep3 [methylation]
GSM4210708
Antrum_differentiated_rep1 [methylation]
GSM4210709
Antrum_differentiated_rep2 [methylation]
GSM4210710
Antrum_differentiated_rep3 [methylation]
GSM4210711
Corpus_undifferentiated_rep1 [methylation]
GSM4210712
Corpus_undifferentiated_rep2 [methylation]
GSM4210713
Corpus_undifferentiated_rep3 [methylation]
GSM4210714
Corpus_differentiated_rep1 [methylation]
GSM4210715
Corpus_differentiated_rep2 [methylation]
GSM4210716
Corpus_differentiated_rep3 [methylation]
GSM4210717
Fundus_undifferentiated_rep1 [methylation]
GSM4210718
Fundus_undifferentiated_rep2 [methylation]
GSM4210719
Fundus_undifferentiated_rep3 [methylation]
GSM4210720
Fundus_differentiated_rep1 [methylation]
GSM4210721
Fundus_differentiated_rep2 [methylation]
GSM4210722
Fundus_differentiated_rep3 [methylation]
GSM5401068
hGAT23 A Mock: Antrum_undifferentiated_mock_rep1
GSM5401069
hGAT23 A 5aza: Antrum_undifferentiated_5aza_rep1
GSM5401070
hGAT26 A Mock: Antrum_undifferentiated_mock_rep2
GSM5401071
hGAT26 A 5aza: Antrum_undifferentiated_5aza_rep2
GSM5411068
Normal_rep1
GSM5411069
Atrophy_rep1
GSM5411070
IM_rep1
GSM5411071
Normal_rep2
GSM5411072
Atrophy_rep2
GSM5411073
IM_rep2
This SuperSeries is composed of the following SubSeries:
GSE141657
Gene expression changes in undifferentiated and differentiated human primary epithelial cells of antrum, corpus, and fundus
GSE141659
DNA methylation changes in undifferentiated and differentiated human primary epithelial cells of antrum, corpus, and fundus
Relations
BioProject
PRJNA594318
Download family
Format
SOFT formatted family file(s)
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MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE141660_RAW.tar
743.5 Mb
(http)
(custom)
TAR (of IDAT, TXT)
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