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Status |
Public on Dec 17, 2019 |
Title |
Identification of GLYMA.13G317000 binding sites in soybean early maturation embryos. |
Organism |
Glycine max |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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Summary |
To dissect the gene regulatory networks operating during soybean embryo development, we identified the binding sites genome-wide for transcription factor GLYMA.13G317000 in early maturation embryos using ChIP-seq.
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Overall design |
Identification of GLYMA.13G317000 binding sites in soybean embryos at the early maturation stage. ChIP and total chromatin controls (input) were obtained for two biological replicates. A total of 4 samples were sequenced using the Illumina HiSeq3000 platform.
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Contributor(s) |
Pelletier J, Baden R, Jo L, Chen M, Golberg RB, Harada JJ |
Citation missing |
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Submission date |
Nov 19, 2019 |
Last update date |
Dec 21, 2019 |
Contact name |
John Harada |
E-mail(s) |
jjharada@ucdavis.edu
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Organization name |
University of California
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Department |
Plant Biology
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Lab |
Harada lab
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Street address |
One Shields Avenue
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City |
Davis |
State/province |
CA |
ZIP/Postal code |
95616 |
Country |
USA |
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Platforms (1) |
GPL23486 |
Illumina HiSeq 3000 (Glycine max) |
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Samples (4)
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GSM4182147 |
GmEM-Input_br2 (GLYMA.13G317000 control) |
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Relations |
BioProject |
PRJNA590535 |
SRA |
SRP230647 |