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| Status |
Public on Oct 05, 2020 |
| Title |
Next Generation Sequencing Facilitates Quantitative Analysis of cmtR-deleted mutant and wild-type strains Transcriptomes in Mycobacterium tuberculosis H37Ra |
| Organism |
Mycobacterium tuberculosis H37Ra |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Compare the gene expression difference between MRA_2010 knockout strains and wild-type strains by RNA sequencing in Mycobacterium tuberculosis H37Ra. The goal of this study is that detection cmtR acts as a transcriptional factor and regulates the target genes expression.
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| |
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| Overall design |
Two samples in triplicate are analyzed. The control sample is the wild-type strains in Mycobacterium tuberculosis H37Ra.
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| |
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| Contributor(s) |
He Z, Li X |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 07, 2019 |
| Last update date |
Oct 05, 2020 |
| Contact name |
Li xiao hui |
| E-mail(s) |
chenliu@mail.hzau.edu.cn
|
| Organization name |
Huazhong Agricultural University
|
| Street address |
Shizishan Street No. 1, Hongshan District
|
| City |
Wuhan |
| State/province |
Hubei |
| ZIP/Postal code |
430070 |
| Country |
China |
| |
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| Platforms (1) |
| GPL27144 |
Illumina HiSeq 2500 (Mycobacterium tuberculosis H37Ra) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA588288 |
| SRA |
SRP229117 |
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