|
| Status |
Public on Nov 06, 2019 |
| Title |
Transcriptome of Actinosynnema pretiosum ATCC 31280 under exogenous supplement of AP-3 |
| Organism |
Actinosynnema pretiosum |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In search of AP-3 resistant genes, ATCC 31280â–³ansaA (inactivation of ansamitocin pksA, in avoiding of the interruption of endogenous generated AP-3) were cultured under the addition of 0, 50, 100 and 200 mg/L exogenous AP-3 for 24 h and collected, for strains under 200 mg/L AP-3, samples after 48 h and 72 h were also collected, and the RNA samples were collected and sent for sequencing.
|
| |
|
| Overall design |
Exploration of the expression profile of genes under exogenous addition of AP-3 and search for ansamitocin resistant genes.
|
| |
|
| Contributor(s) |
Wang X, Ning X, Bai L |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Nov 05, 2019 |
| Last update date |
Nov 07, 2019 |
| Contact name |
Xinran Wang |
| E-mail(s) |
xr.wang@siat.ac.cn
|
| Phone |
17841120985
|
| Organization name |
Shenzhen Institute of Advanced Technology, Chinese Acadamy of Science
|
| Department |
Center for Synthetic Biochemistry
|
| Lab |
Keasling and Luo Lab
|
| Street address |
No.1068 Xueyuan Avenue
|
| City |
Shenzhen |
| State/province |
Guangdong |
| ZIP/Postal code |
518100 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL25168 |
Illumina HiSeq 2500 (Actinosynnema pretiosum) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA587649 |
| SRA |
SRP228578 |
Less...
More...