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Series GSE139923 Query DataSets for GSE139923
Status Public on Nov 06, 2019
Title Connect-seq to superimpose molecular on anatomical neural circuit maps
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report RNA sequencing of single virus-infected neurons upstream of neurons producing corticotropin-releasing hormone (CRH). Analyses of PRV-infected transcriptomes reveal neurons upstream of CRH neurons express diverse and a large variety of signaling molecules. The molecular identities of upstream neurons can be used to superimpose a molecular on neuroanatomical circuit maps.
 
Overall design Identification of neuronal signalling molecules in individual neuronal components in neural circuits
 
Contributor(s) Buck L
Citation(s) 32034095
Submission date Nov 05, 2019
Last update date Feb 11, 2020
Contact name Linda Buck
E-mail(s) lbuck@fhcrc.org
Phone 2066676316
Organization name Fred Hutchinson Cancer Research Centre
Department Basic Sciences
Lab Buck Lab
Street address 1100 fairview ave North
City Seattle
State/province Washington
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (362)
GSM4149303 Neuron1
GSM4149304 Neuron2
GSM4149305 Neuron3
Relations
BioProject PRJNA587638
SRA SRP228572

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE139923_genes.fpkm_table.txt.gz 7.4 Mb (ftp)(http) TXT
GSE139923_signaling.molecules.fpkm_table.txt.gz 4.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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