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Series GSE139248 Query DataSets for GSE139248
Status Public on Nov 10, 2019
Title DENDRO: genetic heterogeneity profiling and subclone detection by single-cell RNA sequencing
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We delineate subclonal expansion in a mouse melanoma models in response to immunotherapy, highlighting the role of neoantigens
 
Overall design Examination of subclone differences by single cell RNA sequencing
 
Contributor(s) Xu B, Zhou Z
Citation(s) 31937348
Submission date Oct 22, 2019
Last update date Jan 27, 2020
Contact name Zilu Zhou
E-mail(s) zhouzilu@pennmedicine.upenn.edu
Organization name University of Pennsylvania
Street address 3730 Walnut St
City Philadelphia
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (6)
GSM4134611 B16_1
GSM4134612 B16_2
GSM4134613 B16_PD1_1
Relations
BioProject PRJNA578900
SRA SRP226622

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE139248_B16_R499_TPM.csv.gz 7.0 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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