|
| Status |
Public on Mar 09, 2020 |
| Title |
miR-302 is a temporal regulator of neural crest development [Mouse RNA-seq] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We analyzed wildtype and miR-302 knockout embryos at E7.5 and sorted neural crest using Wnt1-Cre at E8.5 and Sox9 at E9.5 to capture transcriptomic differences during neural crest development
|
| |
|
| Overall design |
Wildtype and miR-302 knockout embryos were analyzed at each timepoint E7.5, E8.5, and E9.5
|
| |
|
| Contributor(s) |
Keuls RA, Parchem RJ |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Sep 10, 2019 |
| Last update date |
Mar 09, 2020 |
| Contact name |
Rachel Keuls |
| Organization name |
Baylor College of Medicine
|
| Lab |
Ronald Parchem Lab
|
| Street address |
One Baylor Plaza, Alkek N1020
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (16)
|
|
| This SubSeries is part of SuperSeries: |
| GSE137241 |
miR-302 is a temporal regulator of neural crest development |
|
| Relations |
| BioProject |
PRJNA564851 |
| SRA |
SRP221297 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE137227_E7.5_NormalizedCounts.csv.gz |
427.0 Kb |
(ftp)(http) |
CSV |
| GSE137227_E7.5_SigDown.xlsx |
215.9 Kb |
(ftp)(http) |
XLSX |
| GSE137227_E7.5_SigUp.csv.gz |
142.9 Kb |
(ftp)(http) |
CSV |
| GSE137227_E8.5_Normalized_Counts.csv.gz |
731.3 Kb |
(ftp)(http) |
CSV |
| GSE137227_E8.5_SigDown.csv.gz |
26.7 Kb |
(ftp)(http) |
CSV |
| GSE137227_E8.5_SigUp.csv.gz |
32.3 Kb |
(ftp)(http) |
CSV |
| GSE137227_E9.5_NormalizedCounts.csv.gz |
407.0 Kb |
(ftp)(http) |
CSV |
| GSE137227_E9.5_SigDown.csv.gz |
197.0 Kb |
(ftp)(http) |
CSV |
| GSE137227_E9.5_SigUp.csv.gz |
210.7 Kb |
(ftp)(http) |
CSV |
| GSE137227_RNA-seq_Timecourse_And_ClusterAnalysis.xlsx |
4.6 Mb |
(ftp)(http) |
XLSX |
| GSE137227_miR-302target_selection_analysis.xlsx |
1003.4 Kb |
(ftp)(http) |
XLSX |
| GSE137227_miRNA_target_analysis.xlsx |
11.3 Mb |
(ftp)(http) |
XLSX |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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