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Series GSE137179 Query DataSets for GSE137179
Status Public on Sep 10, 2019
Title Exome sequencing of thymus transplantation based spontaneous murine T cell acute lymphoblastic leukemia (T-ALL) model
Organism Mus musculus
Experiment type Genome variation profiling by high throughput sequencing
Summary We adapted a spontaneously-arising, genetically-heterogeneous, thymic transplantation-based murine model of T-ALL, recapitulating key histopathological and genetic features of the human disease, to the preclinical testing of targeted and immune-directed therapies.
 
Overall design Wild-type thymus-derived T-ALL samples were subjected to exome sequencing
 
Contributor(s) Gao J
Citation(s) 31399482
Submission date Sep 10, 2019
Last update date Oct 08, 2019
Contact name Qi Zhao
E-mail(s) qi.zhao@regeneron.com
Organization name Regeneron Pharmaceuticals Inc
Street address 777 Old Saw Mill River Road
City Tarrytown
ZIP/Postal code 10591
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (19)
GSM4072509 WT-derived T-ALL 3 (Exome-seq)
GSM4072510 WT-derived T-ALL 4 (Exome-seq)
GSM4072511 WT-derived T-ALL 5 (Exome-seq)
This SubSeries is part of SuperSeries:
GSE137181 Therapeutic targeting of Notch signaling and immune checkpoint blockade in a spontaneous, genetically-heterogeneous mouse model of T-cell acute lymphoblastic leukemia
Relations
BioProject PRJNA564896
SRA SRP221421

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137179_processed_T-ALL_ExomeSeq_somatic_mutation.txt.gz 20.4 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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