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| Status |
Public on Aug 26, 2022 |
| Title |
Induction of autoreactive regulatory T cells through promiscuous gene expression by bone marrow-resident Aire+ antigen-presenting cells |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation missing |
Has this study been published? Please login to update or notify GEO. |
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| Submission date |
Aug 29, 2019 |
| Last update date |
Aug 28, 2022 |
| Contact name |
Philipp Beckhove |
| E-mail(s) |
philipp.beckhove@rcii.de
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| Organization name |
Regensburg Center for Interventional Immunology
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| Street address |
Franz-Josef-Strauss-Allee 11
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| City |
Regensburg |
| ZIP/Postal code |
93053 |
| Country |
Germany |
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| Platforms (2) |
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| Samples (33)
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| GSM4054535 |
Donor 6.5TCR T cells which were not converted to Tregs, rep1 |
| GSM4054536 |
Donor 6.5TCR T cells which were not converted to Tregs, rep2 |
| GSM4054537 |
Donor 6.5TCR T cells which were converted to Tregs, rep1 |
| GSM4054538 |
Donor 6.5TCR T cells which were converted to Tregs, rep2 |
| GSM4054539 |
Host WT conventional T cells, rep1 |
| GSM4054540 |
Host WT conventional T cells, rep2 |
| GSM4054541 |
in vitro-induced Tregs, rep1 |
| GSM4054542 |
in vitro-induced Tregs, rep2 |
| GSM4054543 |
Host pTregs, rep1 |
| GSM4054544 |
Host pTregs, rep2 |
| GSM4054545 |
Host tTregs, rep1 |
| GSM4054546 |
Host tTregs, rep2 |
| GSM4054547 |
Bone marrow plasma cells, rep1 |
| GSM4054548 |
Bone marrow plasma cells, rep2 |
| GSM4054549 |
bone marrow immature B cells, rep1 |
| GSM4054550 |
bone marrow immature B cells, rep2 |
| GSM4054551 |
pc-BMACs, rep1 |
| GSM4054552 |
pc-BMACs, rep2 |
| GSM4060088 |
Bisulfite-seq_Donor 6.5TCR T cells which were not converted to Tregs, rep1 |
| GSM4060089 |
Bisulfite-seq_Donor 6.5TCR T cells which were not converted to Tregs, rep2 |
| GSM4060090 |
Bisulfite-seq_Donor 6.5TCR T cells which were not converted to Tregs, rep3 |
| GSM4060091 |
Bisulfite-seq_Donor 6.5TCR T cells which were converted to Tregs, rep1 |
| GSM4060092 |
Bisulfite-seq_Donor 6.5TCR T cells which were converted to Tregs, rep2 |
| GSM4060093 |
Bisulfite-seq_Donor 6.5TCR T cells which were converted to Tregs, rep3 |
| GSM4060094 |
Bisulfite-seq_in vitro-induced Tregs, rep1 |
| GSM4060095 |
Bisulfite-seq_in vitro-induced Tregs, rep2 |
| GSM4060096 |
Bisulfite-seq_in vitro-induced Tregs, rep3 |
| GSM4060097 |
Bisulfite-seq_Host pTregs, rep1 |
| GSM4060098 |
Bisulfite-seq_Host pTregs, rep2 |
| GSM4060099 |
Bisulfite-seq_Host pTregs, rep3 |
| GSM4060100 |
Bisulfite-seq_Host tTregs, rep1 |
| GSM4060101 |
Bisulfite-seq_Host tTregs, rep2 |
| GSM4060102 |
Bisulfite-seq_Host tTregs, rep3 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE136648 |
Evaluation of Genome-wide chromatin accessibility of BM T cell subsets [ATAC_TC] |
| GSE136649 |
Assessment of genome-wide chromatin accessibility of subsets of bone marrow-resident antigen presenting cells [ATAC_BMACs] |
| GSE136875 |
Assessment of the stabilty of Treg cell subsets in the bone marrow [targeted Bisulfite-seq] |
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| Relations |
| BioProject |
PRJNA562921 |
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