|
| Status |
Public on Oct 01, 2019 |
| Title |
16S rDNA Amplicon Sequencing Analysis of Polystyrene Microplastic Exposed Zebrafish Intestine |
| Organism |
Danio rerio |
| Experiment type |
Other
|
| Summary |
Microplastics (MPs) as widespread contamination pose high risk for aquatic organisms.Intestinal microbiotahas have high interaction with immune system of host body. In this study, intestinal microbiota of zebrafish after Polystyrene (PS-MPs) exposure were characterized by 16S rDNA amplicon sequencing. We found that 100nm and 200μm PS-MPs exposure significantly increased diversity of intestinal microbiota and all the three sizes of PS-MPs increased abundance of pathogenic bacteria.
|
| |
|
| Overall design |
Detection of intestine microbes were conducted in zebrafish followed treatment of MPs with different size (100nm, 5μm and 200μm). For each assay, three individual trials were taken.
|
| |
|
| Contributor(s) |
Wu B, Gu W |
| Citation(s) |
32092251 |
| |
| Submission date |
Aug 21, 2019 |
| Last update date |
Mar 01, 2020 |
| Contact name |
Gu Weiqing |
| E-mail(s) |
gwq960722@sina.com
|
| Phone |
13962113111
|
| Organization name |
Nanjing University
|
| Street address |
Xianlin
|
| City |
Nanjing |
| ZIP/Postal code |
210023 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL27125 |
Ion Torrent S5 XL (Danio rerio) |
|
| Samples (12)
|
|
| This SubSeries is part of SuperSeries: |
| GSE136109 |
Single Cell RNA Sequencing and Intestinal Microbial Analysis of Polystyrene Microplastic Exposed Zebrafish Intestine |
|
| Relations |
| BioProject |
PRJNA561331 |
| SRA |
SRP218986 |
Less...
More...