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Series GSE13605 Query DataSets for GSE13605
Status Public on Nov 17, 2008
Title AGO1-dependent Small RNA in Arabidopsis Identified by High-Throughput Sequencing
Organism Arabidopsis thaliana
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The goal of this study was to identify AGO1-dependent miRNA and tasiRNA in Arabidopsis by sequencing small RNA from wild type (Col-0) and ago1-25 plants.

Keywords: Small RNA
Overall design Sequencing-by-synthesis technology was used to sequence small RNA from flower tissue (stages 1-12) from wild-type (Col-0) and ago1-25 Arabidopsis thaliana plants. Three biological replicates were sequenced for both Col-0 and ago1-25.
Contributor(s) Montgomery TA
Citation(s) 19066226
Submission date Nov 14, 2008
Last update date May 15, 2019
Contact name James C Carrington
Phone 314-587-1202
Organization name Donald Danforth Plant Science Center
Lab James C. Carrington
Street address 975 North Warson Road
City Saint Louis
State/province MO
ZIP/Postal code 63132
Country USA
Platforms (1)
GPL9062 Illumina Genome Analyzer (Arabidopsis thaliana)
Samples (6)
GSM342999 Col-0 biological replicate 1
GSM343000 Col-0 biological replicate 2
GSM343001 Col-0 biological replicate 3
SRA SRP000625
BioProject PRJNA110625

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Processed data included within Sample table
Raw data are available in SRA

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