|
| Status |
Public on Nov 17, 2008 |
| Title |
AGO1-dependent Small RNA in Arabidopsis Identified by High-Throughput Sequencing |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
The goal of this study was to identify AGO1-dependent miRNA and tasiRNA in Arabidopsis by sequencing small RNA from wild type (Col-0) and ago1-25 plants.
Keywords: Small RNA
|
| |
|
| Overall design |
Sequencing-by-synthesis technology was used to sequence small RNA from flower tissue (stages 1-12) from wild-type (Col-0) and ago1-25 Arabidopsis thaliana plants. Three biological replicates were sequenced for both Col-0 and ago1-25.
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| |
|
| Contributor(s) |
Montgomery TA |
| Citation(s) |
19066226 |
| |
| Submission date |
Nov 14, 2008 |
| Last update date |
May 15, 2019 |
| Contact name |
James C Carrington |
| E-mail(s) |
jcarrington@danforthcenter.org
|
| Phone |
314-587-1202
|
| Organization name |
Donald Danforth Plant Science Center
|
| Lab |
James C. Carrington
|
| Street address |
975 North Warson Road
|
| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63132 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9062 |
Illumina Genome Analyzer (Arabidopsis thaliana) |
|
| Samples (6)
|
|
| Relations |
| SRA |
SRP000625 |
| BioProject |
PRJNA110625 |
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