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Series GSE135448 Query DataSets for GSE135448
Status Public on Jul 13, 2020
Title High- and low-protein diet: effects on human hepatic fat content, autophagy, mitochondrial function and fat metabolism
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Non-alcoholic fatty liver disease (NAFLD) is becoming increasingly prevalent and nutrition intervention remains the most important therapeutic approach for NAFLD. Our aim was to investigate whether low- (LP) or high-protein (HP) diets are more effective in reducing liver fat and reversing NAFLD. Here RNA-seq analysis was used to analyse which metabolic pathways that were altered on the LP and HP diets.
 
Overall design 19 morbidly obese subjects undergoing bariatric surgery were randomized into two hypocaloric (1500 kcal/day) diet groups, a low protein (LP: 10 E% protein, n=10) and a high protein (HP: 30 E% protein, n=9), for three weeks prior to surgery. RNA-seq analyses were performed on liver samples collected during surgery.
 
Contributor(s) Xu C, Markova M, Loft A, Herzig S, Pivovarova-Ramich O, Pfeiffer AF
Citation(s) 32652799
Submission date Aug 06, 2019
Last update date Jul 13, 2020
Contact name Anne Loft
E-mail(s) anlo@bmb.sdu.dk
Organization name University of Southern Denmark
Department Biochemistry & Molecular Biology
Street address Campusvej 55
City Odense M
ZIP/Postal code 5230
Country Denmark
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (19)
GSM4010333 MUC3855_LS01_HP_RNA_Seq
GSM4010334 MUC3856_LS03_HP_RNA_Seq
GSM4010335 MUC3857_LS13_HP_RNA_Seq
Relations
BioProject PRJNA558947
SRA SRP217536

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135448_Diff_Expression_LPvsHP.txt.gz 619.5 Kb (ftp)(http) TXT
GSE135448_unnormalized.count.table.liver_HP_LP.txt.gz 711.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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