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Series GSE135313 Query DataSets for GSE135313
Status Public on Nov 22, 2021
Title ngs2017_12_ddm1-Hypomethylation and drought stress on transcriptome
Organism Populus tremula x Populus alba
Experiment type Expression profiling by high throughput sequencing
Summary ngs2017_12_ddm1-ngs2017_12_ddm1-Rôle of poplar DDM1 on genes expression under water availability variation-Effect of hypomethylation and drought on genes expression
 
Overall design 6 samples with 3 biological replicates. normal vs rnai mutant comparaison
Web link http://tools.ips2.u-psud.fr/CATdb
 
Contributor(s) Caius J, Maury S, Taconnat-Soubig L
Citation(s) 34128549
Submission date Aug 02, 2019
Last update date Feb 21, 2022
Contact name Véronique BRUNAUD
E-mail(s) veronique.brunaud@inrae.fr
Organization name INRAE - CNRS - UPSUD
Lab IPS2
Street address rue Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
 
Platforms (1)
GPL22466 Illumina NextSeq 500 (Populus tremula x Populus alba)
Samples (6)
GSM4005150 Shoot apex, CTRL_1
GSM4005151 Shoot apex, CTRL_2
GSM4005152 Shoot apex, CTRL_3
Relations
BioProject PRJNA558677
SRA SRP217474

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135313_RAW.tar 1.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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