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Series GSE135267 Query DataSets for GSE135267
Status Public on Aug 02, 2019
Title Identification of Soybean WOX9-like binding sites in soybean seeds during seed development
Organism Glycine max
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To dissect the gene regulatory networks operating during soybean seed development, we identified the binding sites genome-wide for transcription factor in soybean seeds during seed development using ChIP-seq
Overall design Identification of soybean WOX9-like binding sites in soybean seeds during seed development. ChIP and total chromatin controls (input) were obtained for two replicates. Samples were sequenced using the Illumina HiSeq2500 platform.
Contributor(s) Goldberg RB, Apuya N, Chen M
Citation(s) 33536344
Submission date Aug 01, 2019
Last update date Apr 20, 2021
Contact name Bob Goldberg
Phone 310-825-3270
Organization name University of California, Los Angeles
Department Molecular, Cell and Developmental Biology
Street address 610 Charles E Young Drive East
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
Platforms (2)
GPL19246 Illumina HiSeq 2500 (Glycine max)
GPL28801 Illumina NovaSeq 6000 (Glycine max)
Samples (8)
GSM4001147 globular-seed-WOX9-like ChIP replicate 1
GSM4001148 heart-seed-WOX9-like ChIP replicate 1
GSM4001149 heart-seed-WOX9-like ChIP replicate 2
BioProject PRJNA558072

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Supplementary file Size Download File type/resource
GSE135267_RAW.tar 4.3 Mb (http)(custom) TAR (of NARROWPEAK)
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Raw data are available in SRA
Processed data provided as supplementary file

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