GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE135265 Query DataSets for GSE135265
Status Public on Aug 02, 2019
Title Identification of Soybean AGL62-like binding sites in soybean seeds during seed development
Organism Glycine max
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To dissect the gene regulatory networks operating during soybean seed development, we identified the binding sites genome-wide for transcription factor in soybean seeds during seed development using ChIP-seq
Overall design Identification of soybean WOX9-like binding sites in soybean seeds during seed development. ChIP and total chromatin controls (input) were obtained for two replicates. Samples were sequenced using the Illumina HiSeq2500 platform.
Contributor(s) Goldberg RB, Apuya N, Chen M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Aug 01, 2019
Last update date Aug 04, 2019
Contact name Bob Goldberg
Phone 310-825-3270
Organization name University of California, Los Angeles
Department Molecular, Cell and Developmental Biology
Street address 610 Charles E Young Drive East
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
Platforms (1)
GPL19246 Illumina HiSeq 2500 (Glycine max)
Samples (2)
GSM4001138 globular-seed-AGL62-like ChIPreplicate 1
GSM4001139 globular-seed-input replicate 1 (AGL62 study)
BioProject PRJNA558071

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135265_RAW.tar 410.0 Kb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap