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Series GSE134798 Query DataSets for GSE134798
Status Public on Jul 07, 2020
Title Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32710624
Submission date Jul 24, 2019
Last update date Oct 06, 2020
Contact name Jose Manuel Garcia-Manteiga
E-mail(s) garciamanteiga.josemanuel@hsr.it
Organization name OSR - San Raffaele Scientific Institute
Department Center for Translational Genomics and Bioinformatics
Street address Via Olgettina 58
City Milan
State/province --
ZIP/Postal code 20132
Country Italy
 
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (34)
GSM3970404 shCTRL RNA-Seq Replicate A
GSM3970405 shCTRL RNA-Seq Replicate B
GSM3970406 shCTRL RNA-Seq Replicate C
This SuperSeries is composed of the following SubSeries:
GSE134795 Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells (RNA-seq)
GSE134796 Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells (ATAC-seq)
GSE134797 Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells (BLISS)
Relations
BioProject PRJNA556429

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134798_RAW.tar 2.3 Gb (http)(custom) TAR (of BED, BEDGRAPH, NARROWPEAK)
SRA Run SelectorHelp

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