|
| Status |
Public on Sep 18, 2019 |
| Title |
Characterization of IL-1α–responsive enhancers and of IL-1α -mediated changes in chromatin topology. |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
31701553 |
| |
| Submission date |
Jul 17, 2019 |
| Last update date |
Jan 14, 2020 |
| Contact name |
Marek Bartkuhn |
| E-mail(s) |
marek.bartkuhn@gen.bio.uni-giessen.de
|
| Organization name |
Justus-Liebig-University Giessen
|
| Department |
Biomedical Informatics and Systems Medicine
|
| Street address |
Aulweg 132
|
| City |
Giessen |
| State/province |
Hessen |
| ZIP/Postal code |
35392 |
| Country |
Germany |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL13497 |
Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version) |
|
| Samples (32)
|
|
| This SuperSeries is composed of the following SubSeries: |
| GSE134434 |
The activation of IL-1 induced enhancers depends on TAK1 kinase activity and NF-KB p65 (ATAC-Seq) |
| GSE134435 |
The activation of IL-1 induced enhancers depends on TAK1 kinase activity and NF-KB p65 (ChIP-Seq) |
| GSE137589 |
The global IL-1α gene expression response in p65 enhancer mutant HeLa cells. |
|
| Relations |
| BioProject |
PRJNA555101 |
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