|
| Status |
Public on Dec 05, 2019 |
| Title |
Single-cell RNA-sequencing of spleen memory CD4+ T cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We performed a single-cell transcriptome analysis of 3 biological independent splenic samples from pooled mice sorted for LCMV-specific memory CD4 T cells.
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| |
|
| Overall design |
Cells negative for dump and positive for CD4, CD44 and gp66 were sorted for each replicate, and used for single cell RNA Seq (10x genomics platform)
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| |
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| Contributor(s) |
Kuenzli M, Schreiner D, Roux J, King C |
| Citation(s) |
32144185, 35829695 |
| Submission date |
Jul 11, 2019 |
| Last update date |
Aug 02, 2022 |
| Contact name |
DBM Bioinformatics Core Facility |
| Phone |
+41612073541
|
| Organization name |
University of Basel
|
| Department |
Departement of Biomedicine
|
| Street address |
Hebelstrasse 20
|
| City |
Basel |
| State/province |
BS |
| ZIP/Postal code |
4053 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (3) |
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| This SubSeries is part of SuperSeries: |
| GSE139198 |
Long-lived T follicular helper cells retain plasticity and help sustain humoral immunity |
|
| Relations |
| BioProject |
PRJNA554108 |
| SRA |
SRP214289 |
