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Series GSE133947 Query DataSets for GSE133947
Status Public on Jul 09, 2019
Title Hematopoietic stem cell response to acute thrombocytopenia requires signaling through distinct receptor tyrosine kinases
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Although bone marrow (BM) niche cells are essential for hematopoietic stem cell (HSC) maintenance, their interaction in response to stress is not well defined. Here, we used a mouse model of acute thrombocytopenia to investigate the crosstalk between HSCs and niche cells during restoration of the thrombocyte pool. This process required membrane-localized stem cell factor (m-SCF) in megakaryocytes, which was regulated by vascular endothelial growth factor A (VEGF-A) and platelet-derived growth factor-B (PDGF-B) derived from BM endothelial cells. HSCs and multipotent progenitors 2 (MPP2), but not MPP3/4 were subsequently activated by a dual receptor tyrosine kinase (RTK)-dependent signaling event, namely m-SCF/c-Kit and VEGF-A/VEGFR-2, contributing to their selective and early proliferation. Our findings describe a dynamic network of signals in response to the acute loss of a single blood cell type, and reveal the important role of three RTKs in orchestrating the selective activation of HSCs and progenitor cells in thrombocytopenia.
 
Overall design Examination of hematopoietic stem cells CD41+ vs. CD41- from control mice and 24h after platelet depletion, biological replicates (cells from 3 mice per sample)
 
Contributor(s) Ramasz B, Krüger A, Reinhardt J, Sinha A, Gerlach M, Gerbaulet A, Reinhardt S, Dahl A, Chavakis T, Wielockx B, Grinenko T
Citation(s) 31434705
Submission date Jul 08, 2019
Last update date Feb 09, 2022
Contact name Ben Wielockx
E-mail(s) ben.wielockx@tu-dresden.de
Organization name IKL, Carl Gustav Carus Universitätklinikum Dresden
Street address Fetscherstrasse 74
City Dresden
ZIP/Postal code 01307
Country Germany
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (11)
GSM3930519 s1_ctrl_CD41neg
GSM3930520 s2_ctrl_CD41pos
GSM3930521 s3_ctrl_CD41neg
Relations
BioProject PRJNA553194
SRA SRP213641

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE133947_read_counts.txt.gz 434.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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