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Series GSE133476 Query DataSets for GSE133476
Status Public on Jun 29, 2019
Title Transcriptome profiling for floral bud development in reblooming cultivar 'High Noon' of Paeonia suffruticosa
Organism Paeonia lutea x Paeonia suffruticosa
Experiment type Expression profiling by high throughput sequencing
Summary To examine the mechanisms that control flower development, we sequenced the flower bud transcriptomes of ‘High Noon’, a reblooming cultivar of P. suffruticosa × P. lutea. Both full-length isoforms and RNA-seq were sequenced in 3 floral developmental stages. A total of 15.94 Gb raw data and 457.0 million reads were generated in full-length transcript sequencing and RNA-seq.
Overall design The 3 stage of the floal development in tree peony was sequenced and analyzed, each stage with 3 repeats.
Contributor(s) Chang Y, Hu T, Zhang W, Jiang Z
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Submission date Jun 28, 2019
Last update date Jul 01, 2019
Contact name Yanting Chang
Organization name International Centre for Bamboo and Rattan
Department State Forestry Administration, Institute of Horticultural Flower and Landscape
Street address Futongdong Rd, Wang Jing, Chaoyang District
City Beijing
ZIP/Postal code 100102
Country China
Platforms (1)
GPL26859 Illumina HiSeq 2000 (Paeonia lutea x Paeonia suffruticosa)
Samples (9)
GSM3909906 HNS1_rep1
GSM3909907 HNS1_rep2
GSM3909908 HNS1_rep3
BioProject PRJNA551579
SRA SRP212254

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE133476_HN_bud.FL_NR.fasta.gz 75.0 Mb (ftp)(http) FASTA
GSE133476_RAW.tar 11.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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