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Series GSE132838 Query DataSets for GSE132838
Status Public on Jul 29, 2019
Title RNA Sequencing of CTRL and Heat Stressed C. elegans [RNA-seq]
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary Three independent replicates of wildtype C. elegans were collected at the L4 stage for RNA. Heat Shock was performed at 35C for 4hrs.
 
Overall design RNA-seq libraries were generated for L4 wildtype worms to analyze RNA expression in control vs HS worms.
 
Contributor(s) Chen JS, Schreiner WP
Citation(s) 31396626
Submission date Jun 17, 2019
Last update date Oct 08, 2019
Contact name Amy Pasquinelli
E-mail(s) apasquinelli@ucsd.edu
Phone 858-652-0044
Organization name UCSD
Department Biological Sciences
Lab Dr. Amy Pasquinelli
Street address 9500 Gilman Drive
City San Deigo
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (6)
GSM3893634 CTRL Rep 1 RNA-seq
GSM3893635 CTRL Rep 2 RNA-seq
GSM3893636 CTRL Rep 3 RNA-seq
This SubSeries is part of SuperSeries:
GSE132876 RNA Sequencing of CTRL and Heat Stressed C. elegans
Relations
BioProject PRJNA549257
SRA SRP201610

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132838_Chronic_Heat_Shock_DE.csv.gz 1.4 Mb (ftp)(http) CSV
GSE132838_N2CTRL_Minus_merged.wig.gz 85.7 Mb (ftp)(http) WIG
GSE132838_N2CTRL_Plus_merged.wig.gz 88.7 Mb (ftp)(http) WIG
GSE132838_N2HS_Minus_merged.wig.gz 114.2 Mb (ftp)(http) WIG
GSE132838_N2HS_Plus_merged.wig.gz 115.7 Mb (ftp)(http) WIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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