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Series GSE131350 Query DataSets for GSE131350
Status Public on May 16, 2020
Title DNA Methylation Profiling Reveals Prognostically Significant Groups in Pediatric Adrenocortical Tumors: A Report From the International Pediatric Adrenocortical Tumor Registry
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Pediatric adrenocortical carcinomas (ACCs) are aggressive; the overall survival of pediatric patients with ACCs is 40%-50%. Appropriate staging and histologic classification are crucial as children with incompletely resected tumors or metastatic disease have a dismal prognosis. The clinical course of pediatric adrenocortical tumors (ACTs) is difficult to predict using the current classification schemas, which rely heavily on subjective microscopic and gross macroscopic variables. Recent advances in adult ACT studies have revealed distinct DNA-methylation patterns with prognostic significance that have not been systematically interrogated in the pediatric population.
 
Overall design We performed DNA-methylation analyses on 48 newly diagnosed ACTs from the International Pediatric Adrenocortical Tumors Registry (IPACTR) and 12 pediatric adrenal controls to evaluate for distinct methylation groups. Pediatric methylation data were also compared systematically to the adult ACC cohort from The Cancer Genome Atlas (TCGA).
Web link https://ascopubs.org/doi/full/10.1200/PO.19.00163
 
Contributor(s) Clay M, Orr B, Tran Q
Citation(s) 32923859
Submission date May 16, 2019
Last update date Jun 07, 2022
Contact name Quynh Tran
E-mail(s) qtran@stjude.org
Organization name St. Jude Children's Research Hospital
Department Pathology
Street address 262 Danny Thomas Place, C4029, Mail Stop 250
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platforms (1)
GPL23976 Illumina Infinium HumanMethylation850 BeadChip
Samples (60)
GSM3770869 201557510014_R01C01
GSM3770870 201557510014_R02C01
GSM3770871 201557510014_R04C01
Relations
BioProject PRJNA543319

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131350_Beta_detP.csv.gz 467.6 Mb (ftp)(http) CSV
GSE131350_RAW.tar 849.2 Mb (http)(custom) TAR (of IDAT)
Processed data are available on Series record

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