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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 15, 2020 |
| Title |
Gene-Specific Control of tRNA expression by RNA Polymerase II |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Expression profiling by array
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
32298650 |
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| Submission date |
May 08, 2019 |
| Last update date |
Apr 17, 2020 |
| Contact name |
Alan Gerber |
| E-mail(s) |
agerber@rockefeller.edu
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| Organization name |
The Rockefeller University
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| Lab |
Laboratory of Biochemistry and Molecular Biology
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| Street address |
1230 York Avenue
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| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10065 |
| Country |
USA |
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| Platforms (2) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL17585 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [probe set (exon) version] |
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| Samples (23)
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| GSM3755181 |
RPB3 ChIP-seq, Clone #19 DA |
| GSM3755182 |
Input, Clone #7 Ctl |
| GSM3755183 |
Input, Clone #7 DA |
| GSM3755184 |
Input, Clone #19 Ctl |
| GSM3755185 |
Input, Clone #19 DA |
| GSM3755186 |
RPC62 ChIP-seq, Clone #7 Ctl |
| GSM3755187 |
RPC62 ChIP-seq, Clone #7 DA |
| GSM3755188 |
RPC62 ChIP-seq, Clone #19 Ctl |
| GSM3755189 |
RPC62 ChIP-seq, Clone #19 DA |
| GSM3755266 |
Nascent-RNA, Clone #7 Ctl |
| GSM3755267 |
Nascent-RNA, Clone #7 DA |
| GSM3755268 |
Nascent-RNA, Clone #19 Ctl |
| GSM3755269 |
Nascent-RNA, Clone #19 DA |
| GSM3755538 |
Pool of RNA from three clones, control |
| GSM3755539 |
Pool of RNA from three clones, Dox treated |
| GSM3755540 |
Pool of RNA from three clones, Dox and auxin treated |
| GSM4078771 |
Pool of RNA from three clones, serum starved, control |
| GSM4078772 |
Pool of RNA from three clones, serum starved, stimulated with serum 60 min |
| GSM4078773 |
Pool of RNA from three clones, serum starved, Dox and auxin treated |
| GSM4078774 |
Pool of RNA from three clones, serum starved, Dox and auxin treated, stimulated with serum 60 min |
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| This SuperSeries is composed of the following SubSeries: |
| GSE130847 |
Gene-Specific Control of tRNA expression by RNA Polymerase II (ChIP-seq) |
| GSE130853 |
Gene-Specific Control of tRNA expression by RNA Polymerase II (nascent RNA-seq) |
| GSE130877 |
Gene-Specific Control of tRNA expression by RNA Polymerase II (arrays) |
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| Relations |
| BioProject |
PRJNA541871 |
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