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Series GSE130380 Query DataSets for GSE130380
Status Public on Aug 01, 2019
Title RNA-seq analyses of two intestinal dendritic cell subsets, CD103+CD11b- and CD103-CD11b+, from wild type and CbfbF/F:CD11c-Cre mice.
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report phenotypes in gut dendritic cell development by loss of Runx/Cbfb transcription factor complexes. To further examine function of residual CD103+CD11b- and CD103-CD11b+ DCs, we performed RNA-seq analyses and compared gene expression signatures between control and Cbfb-deficient cells.
Overall design Examination of transcriptome of CD103+CD11b- and CD103-CD11b+ intestinal DCs.
Contributor(s) Tenno M, Wong AY, Ikegaya M, Yoshida H, Smith B, Taniuchi I
Citation(s) 31818882
Submission date Apr 26, 2019
Last update date Dec 19, 2019
Contact name Hideyuki Yoshida
Organization name RIKEN IMS
Street address 1-7-22 Suehiro-cho
City Tsurumi-ku, Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM3737159 WT_CD103+CD11b-_rep1
GSM3737160 WT_CD103+CD11b-_rep2
GSM3737161 WT_CD103+CD11b-_rep3
BioProject PRJNA539949
SRA SRP193980

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130380_RAW.tar 2.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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